Scientia Silvae Sinicae ›› 2019, Vol. 55 ›› Issue (10): 193-202.doi: 10.11707/j.1001-7488.20191019
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Xiao Zhang1,2,Shirong Liu2,*,Yongtao Huang1,Shenglei Fu1
Received:
2018-06-22
Online:
2019-10-25
Published:
2019-11-26
Contact:
Shirong Liu
Supported by:
CLC Number:
Xiao Zhang,Shirong Liu,Yongtao Huang,Shenglei Fu. Changes on Community Structure and Diversity of Soil Bacterial Community during the Succession of Quercus wutaishanica[J]. Scientia Silvae Sinicae, 2019, 55(10): 193-202.
Table 1
Plantation characteristics of the different plantations"
林型 Age | 平均树高 Mean height/m | 平均胸径 Mean of DBH/cm | 密度 Stem density (tree·hm-2) | 坡度 Slope degree (°) | 坡向 Slope |
30年生幼龄林30-year-old young forest | 15.2 (6.4) | 12.3 (5.3) | 410 (5.7) | 13.5 (4.5) | 东南Southeast |
80年生中龄林80-year-old middle-aged forest | 18.3 (4.5) | 19.4 (4.7) | 354 (7.1) | 15.8 (4.8) | 东南Southeast |
150年生老龄林150-year-old mature forest | 20.3 (3.8) | 25.5 (4.5) | 284 (5.9) | 14.2 (2.4) | 东南Southeast |
Table 2
Soil properties under different vegetation types"
林龄 Stand age | 有机碳 SOC /(g·kg-1) | 可溶性碳 DOC/ (mg·kg-1) | 全氮 TN /(g·kg-1) | 有效氮 AN/ (mg·kg-1) | pH |
30年生幼龄林30-year-old young forest | 28.15(6.8)a | 455.64 (84.25)b | 2.16(0.89)a | 169.17 (48.69)a | 7.0(0.35)a |
80年生中龄林80-year-old middle-aged forest | 36.43(7.6)b | 403.39 (96.14)ab | 2.38(0.61)ab | 204.64 (66.87)b | 7.1(0.28)a |
150年生老龄林150-year-old mature forest | 48.67(5.4)c | 347.25 (69.47)a | 2.94(0.93)b | 267.73 (76.53)c | 6.9(0.22)a |
李化山, 汪金松, 刘星, 等. 模拟氮沉降对太岳山油松林土壤呼吸的影响及其持续效应. 环境科学学报, 2014. 34 (1): 238- 249. | |
Li H S , Wang J S , Liu X , et al. Effects and its sustained effect of simulated nitrogen deposition on soil respiration in Pinus tabulaeformis forests in the Taiyue Mountain, China. Acta Scientiae Circumstantiae, 2014. 34 (1): 238- 249. | |
刘世荣, 史作民, 马姜明, 等. 长江上游退化天然林恢复重建的生态对策. 林业科学, 2009. 45 (2): 120- 124.
doi: 10.3321/j.issn:1001-7488.2009.02.021 |
|
Liu S R , Shi Z M , Ma J M , et al. Ecological strategies for restoration and reconstruction of degraded natural forests on the upper reaches of the Yangtze river. Scientia Silvae Sinicae, 2009. 45 (2): 120- 124.
doi: 10.3321/j.issn:1001-7488.2009.02.021 |
|
刘星, 汪金松, 赵秀海. 模拟氮沉降对太岳山油松林土壤酶活性的影响. 生态学报, 2015. 35 (14): 4613- 4624. | |
Liu X , Wang J S , Zhao X H . Effects of simulated nitrogen deposition on the soil enzyme activities in a Pinus tabulaeformis forest at the Taiyue Mountain. Acta Ecologica Sinica, 2015. 35 (14): 4613- 4624. | |
苏智先, 王仁卿. 生态学概论. 北京: 高等教育出版杜. 1993. | |
Su Z X , Wang R Q . Outline of review of ecology. Beijing: Higher Education Press. 1993. 176. | |
王希群, 王治明, 王占勤, 等. 山西省太岳山森林的保护价值分析. 林业资源管理, 2012. (4): 29- 32.
doi: 10.3969/j.issn.1002-6622.2012.04.006 |
|
Wang X Q , Wang Z M , Wang Z Q , et al. Protection valus of Taiyue Mountain forests in Shanxi province. Forest Resources Management, 2012. (4): 29- 32.
doi: 10.3969/j.issn.1002-6622.2012.04.006 |
|
Banning N C , Gleeson D B , Grigg A H , et al. Soil microbial community successional patterns during forest ecosystem restoration. Applied and Environmental Microbiology, 2011. 77 (17): 6158- 6164.
doi: 10.1128/AEM.00764-11 |
|
Bardgett R D , van der Putten W H . Belowground biodiversity and ecosystem functioning. Nature, 2014. 515 (7528): 505- 511.
doi: 10.1038/nature13855 |
|
Bernard L , Mougel P A , Maron V , et al. Dynamics and identification of soil microbial populations actively assimilating carbon from 13C-labelled wheat residue as estimated by DNA-and RNA-SIP techniques. Environmental Microbiology, 2007. 9, 752- 764.
doi: 10.1111/j.1462-2920.2006.01197.x |
|
Bissett A , Brown M V , Siciliano S D , et al. Microbial community responses to anthropogenically induced environmental change:towards a systems approach. Ecology Letters, 2013. 16 (s1): 128- 139. | |
Bond P L , Hugenholtz P , Keller J , et al. Bacterial community structures of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors. Applied and Environmental Microbiology, 1995. 61 (5): 1910- 1916. | |
Brandstetter A , Sletten A , Mentler W , et al. Estimating dissolved organic carbon in natural waters by UV absorbance (254 nm). Zeitschrift Für Pflanzenernährung Und Bodenkunde, 1996. 159, 605- 607.
doi: 10.1002/jpln.1996.3581590612 |
|
Camenzind T , Hättenschwiler S , Treseder K K , et al. Nutrient limitation of soil microbial processes in tropical forests. Ecological Monographs, 2018. 88 (1): 4- 21.
doi: 10.1002/ecm.1279 |
|
Carney K M , Matson P A . Plant communities, soil microorganisms, and soil carbon cycling:does altering the world belowground matter to ecosystem functioning?. Ecosystems, 2005. 8 (8): 928- 940.
doi: 10.1007/s10021-005-0047-0 |
|
Cazzolla Gatti R , Dudko A , Lim A , et al. The last 50 years of climate-induced melting of the Maliy Aktru glacier (Altai Mountains, Russia) revealed in a primary ecological succession. Ecology and Evolution, 2018. 8 (15): 7401- 7420.
doi: 10.1002/ece3.4258 |
|
Chase J M . Community assembly:when should history matter?. Oecologia, 2003. 136 (4): 489- 498.
doi: 10.1007/s00442-003-1311-7 |
|
Castle S C , Sullivan B W , Knelman J , et al. Nutrient limitation of soil microbial activity during the earliest stages of ecosystem development. Oecologia, 2017. 185 (3): 513- 524.
doi: 10.1007/s00442-017-3965-6 |
|
Chu H , Neufeld J D , Walker V K , et al. The influence of vegetation type on the dominant soil bacteria, archaea, and fungi in a low arctic tundra landscape. Soil Science Society of America Journal, 2011. 75 (5): 1756- 1765.
doi: 10.2136/sssaj2011.0057 |
|
Doležal J , Yakubov V , Hara T . Plant diversity changes and succession along resource availability and disturbance gradients in Kamchatka. Plant Ecology, 2013. 214 (3): 477- 488. | |
Dvorský M , Doležal J , De Bello F , et al. Vegetation types of East Ladakh:species and growth form composition along main environmental gradients. Applied Vegetation Science, 2011. 14 (1): 132- 147.
doi: 10.1111/j.1654-109X.2010.01103.x |
|
Edgar R C , Haas B J , Clemente J C , et al. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics, 2011. 27 (16): 2194- 2200.
doi: 10.1093/bioinformatics/btr381 |
|
Faith D P . Conservation evaluation and phylogenetic diversity. Biological Conservation, 1992. 61 (1): 1- 10.
doi: 10.1016/0006-3207(92)91201-3 |
|
Ferrenberg S , O'Neill S P , Knelman J E , et al. Changes in assembly processes in soil bacterial communities following a wildfire disturbance. The ISME Journal, 2013. 7 (6): 1102- 1111.
doi: 10.1038/ismej.2013.11 |
|
Fierer N , Nemergut D , Knight R , et al. Changes through time:integrating microorganisms into the study of succession. Research in Microbiology, 2010. 161 (8): 635- 642.
doi: 10.1016/j.resmic.2010.06.002 |
|
Freeman K R , Pescador M Y , Reed S C , et al. Soil CO2 flux and photoautotrophic community composition in high-elevation, 'barren' soil. Environmental Microbiology, 2009. 11 (3): 674- 686.
doi: 10.1111/j.1462-2920.2008.01844.x |
|
Grigal D F . Effects of extensive forest management on soil productivity. Forest Ecology and Management, 2000. 138 (1): 167- 185. | |
Handelsman J . Metagenomics:application of genomics to uncultured microorganisms. Microbiology and Molecular Biology Reviews, 2004. 68, 669- 685.
doi: 10.1128/MMBR.68.4.669-685.2004 |
|
Harris J . Measurements of the soil microbial community for estimating the success of restoration. European Journal of Soil Science, 2003. 54 (4): 801- 808. | |
Hart S A , Chen H Y . Fire, logging, and overstory affect understory abundance, diversity, and composition in boreal forest. Ecological Monographs, 2008. 78 (1): 123- 140.
doi: 10.1890/06-2140.1 |
|
Hugenholtz P , Goebel B M , Pace N R . Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. Journal of Bacteriology, 1998. 180 (18): 4765- 4774. | |
Johnson E A , Miyanishi K . Testing the assumptions of chronosequences in succession. Ecology Letters, 2008. 11 (5): 419- 431.
doi: 10.1111/j.1461-0248.2008.01173.x |
|
Jurgensen M , Harvey A , Graham R , et al. Review article:Impacts of timber harvesting on soil organic matter, nitrogen, productivity, and health of inland northwest forests. Forest Science, 1997. 43 (2): 234- 251. | |
Kardol P , Martijn Bezemer T , van der Putten W H . Temporal variation in plant-soil feedback controls succession. Ecology Letters, 2006. 9 (9): 1080- 1088.
doi: 10.1111/j.1461-0248.2006.00953.x |
|
Keenan R J , Kimmins J . The ecological effects of clear-cutting. Environmental Reviews, 1993. 1 (2): 121- 144.
doi: 10.1139/a93-010 |
|
Kuramae E E , Gamper H A , Yergeau E , et al. Microbial secondary succession in a chronosequence of chalk grasslands. The ISME Journal, 2010. 4 (5): 711- 715.
doi: 10.1038/ismej.2010.11 |
|
Lage M D , Reed H E , Weihe C , et al. Nitrogen and phosphorus enrichment alter the composition of ammonia-oxidizing bacteria in salt marsh sediments. The ISME Journal, 2010. 4 (7): 933- 944.
doi: 10.1038/ismej.2010.10 |
|
Maidak B L , Olsen G J , Larsen N , et al. The RDP (ribosomal database project). Nucleic Acids Research, 1997. 25 (1): 109- 110.
doi: 10.1093/nar/25.1.109 |
|
Mariani L , Chang S X , Kabzems R . Effects of tree harvesting, forest floor removal, and compaction on soil microbial biomass, microbial respiration, and N availability in a boreal aspen forest in British Columbia. Soil Biology and Biochemistry, 2006. 38 (7): 1734- 1744.
doi: 10.1016/j.soilbio.2005.11.029 |
|
Morrissey E M , Mau R L , Schwartz E , et al. Bacterial carbon use plasticity, phylogenetic diversity and the priming of soil organic matter. The ISME Journal, 2017. 11 (8): 1890.
doi: 10.1038/ismej.2017.43 |
|
Nannipieri P , Ascher J , Ceccherini M , et al. Microbial diversity and soil functions. European Journal of Soil Science, 2017. 68 (1): 12- 26. | |
Nemergut D R , Anderson S P , Cleveland C C , et al. Microbial community succession in an unvegetated, recently deglaciated soil. Microbial Ecology, 2007. 53 (1): 110- 122. | |
Ortiz-Álvarez R , Fierer N , de Los Ríos A , et al. Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession. The ISME Journal, 2018. 12 (7): 1658- 1667.
doi: 10.1038/s41396-018-0076-2 |
|
Palmer M A , Ambrose R F , Poff N L . Ecological theory and community restoration ecology. Restoration Ecology, 1997. 5 (4): 291- 300.
doi: 10.1046/j.1526-100X.1997.00543.x |
|
Piao Z , Yang L , Zhao L , et al. Actinobacterial community structure in soils receiving long-term organic and inorganic amendments. Applied and Environmental Microbiology, 2008. 74 (2): 526- 530.
doi: 10.1128/AEM.00843-07 |
|
Price M N , Dehal P S , Arkin A P . FastTree 2-approximately maximum-likelihood trees for large alignments. PloS One, 2010. 5 (3): e9490.
doi: 10.1371/journal.pone.0009490 |
|
Qiao N , Wang J , Xu X , et al. Priming alters soil carbon dynamics during forest succession. Biology and Fertility of Soils, 2019. 55 (4): 339- 350.
doi: 10.1007/s00374-019-01351-0 |
|
Rousk J , Bååth E , Brookes P C , et al. Soil bacterial and fungal communities across a pH gradient in an arable soil. The ISME Journal, 2010. 4 (10): 1340- 1351.
doi: 10.1038/ismej.2010.58 |
|
Rui J , Li J , Wang S , et al. Responses of bacterial communities to simulated climate changes in alpine meadow soil of the Qinghai-Tibet Plateau. Applied and Environmental Microbiology, 2015. 81 (17): 6070- 6077.
doi: 10.1128/AEM.00557-15 |
|
Schlesinger W H. 1986. Changes in soil carbon storage and associated properties with disturbance and recovery//Schlesinger W H. The Changing Carbon Cycle. Springer New York, NY, 194-220. | |
Schnurr-Pütz S , Bååth E , Guggenberger G , et al. Compaction of forest soil by logging machinery favours occurrence of prokaryotes. FEMS Microbiology Ecology, 2006. 58 (3): 503- 516. | |
Singh J , Raghubanshi A , Singh R , et al. Microbial biomass acts as a source of plant nutrients in dry tropical forest and savanna. Nature, 1989. 338 (6215): 499- 500.
doi: 10.1038/338499a0 |
|
Šnajdr J , Dobiášová P , Urbanová M , et al. Dominant trees affect microbial community composition and activity in post-mining afforested soils. Soil Biology and Biochemistry, 2013. 56, 105- 115.
doi: 10.1016/j.soilbio.2012.05.004 |
|
Spohn M , Novák T J , Incze J , et al. Dynamics of soil carbon, nitrogen, and phosphorus in calcareous soils after land-use abandonment-A chronosequence study. Plant and Soil, 2016. 401 (1/2): 185- 196. | |
Srivastava D S , Cadotte M W , MacDonald A A M , et al. Phylogenetic diversity and the functioning of ecosystems. Ecology Letters, 2012. 15 (7): 637- 648.
doi: 10.1111/j.1461-0248.2012.01795.x |
|
Stegen J C , Lin X , Konopka A E , et al. Stochastic and deterministic assembly processes in subsurface microbial communities. The ISME Journal, 2012. 6 (9): 1653- 1664.
doi: 10.1038/ismej.2012.22 |
|
Torsvik V , Øvreås L . Microbial diversity and function in soil:from genes to ecosystems. Current Opinion in Microbiology, 2002. 5 (3): 240- 245.
doi: 10.1016/S1369-5274(02)00324-7 |
|
Tsagaraki T M , Pree B , Leiknes Ø , et al. Bacterial community composition responds to changes in copepod abundance and alters ecosystem function in an Arctic mesocosm study. The ISME Journal, 2018. 12 (11): 2694- 2705.
doi: 10.1038/s41396-018-0217-7 |
|
Valiela I , Cole M L . Comparative evidence that salt marshes and mangroves may protect seagrass meadows from land-derived nitrogen loads. Ecosystems, 2002. 5, 92- 102.
doi: 10.1007/s10021-001-0058-4 |
|
van Dijk J , Didden W A , Kuenen F , et al. Can differences in soil community composition after peat meadow restoration lead to different decomposition and mineralization rates?. Soil Biology and Biochemistry, 2009. 41 (8): 1717- 1725.
doi: 10.1016/j.soilbio.2009.05.016 |
|
Willers C , Jansen van Rensburg P , Claassens S . Phospholipid fatty acid profiling of microbial communities-a review of interpretations and recent applications. Journal of Applied Microbiology, 2015. 119 (5): 1207- 1218.
doi: 10.1111/jam.12902 |
|
Xiang X J , Shi Y P , Yang J B , et al. Rapid recovery of soil bacterial communities after wildfire in a Chinese boreal forest. Scientific Reports, 2014. 4, 3829. | |
Yao M , Rui J P , Li J B , et al. Rate-specific responses of prokaryotic diversity and structure to nitrogen deposition in the Leymus chinensis steppe. Soil Biology and Biochemistry, 2014. 79, 81- 90.
doi: 10.1016/j.soilbio.2014.09.009 |
|
Yodzis P. 1986. Competition, mortality, and community structure.//Diamond J M, Case T J. Community Ecology Harper and Row, New York, 480-491. | |
Zhang K , Cheng X , Shu X , et al. Linking soil bacterial and fungal communities to vegetation succession following agricultural abandonment. Plant and Soil, 2018. 431 (1/2): 19- 36. | |
Zhang X , Liu S , Li X , et al. Changes of soil prokaryotic communities after clear-cutting in a karst forest:evidences for cutting-based disturbance promoting deterministic processes. FEMS Microbiology Ecology, 2016. 92 (3): fiw026.
doi: 10.1093/femsec/fiw026 |
|
Zhao C , Long J , Liao H , et al. Dynamics of soil microbial communities following vegetation succession in a karst mountain ecosystem, Southwest China. Scientific Reports, 2019. 9, 2160.
doi: 10.1038/s41598-018-36886-z |
|
Zhou Z H , Wang C K , Jiang L F , et al. Trends in soil microbial communities during secondary succession. Soil Biology and Biochemistry, 2017. 115, 92- 99.
doi: 10.1016/j.soilbio.2017.08.014 |
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