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林业科学 ›› 2026, Vol. 62 ›› Issue (9): 13-27.doi: 10.11707/j.1001-7488.LYKX20260105

• 前沿热点 • 上一篇    

白花泡桐CPP转录因子家族的鉴定及其响应多种逆境的表达模式分析

周梦瑶,魏歌,范宇轩,李恩茜,唐雪飞*(),范国强*()   

  1. 河南农业大学林学院 郑州 450046
  • 收稿日期:2026-01-05 修回日期:2026-04-16 出版日期:2026-09-10 发布日期:2026-09-16
  • 通讯作者: 唐雪飞,范国强 E-mail:Tangxf5@henau.edu.cn;zlxx64@henau.edu.cn
  • 基金资助:
    河南省自然科学基金青年项目(252300423599);河南省博士后科研资助项目(24XM0489)。

Genome-Wide Identification of the CPP Transcription Factor Family in Paulownia fortunei and Analysis of Their Expression Patterns in Response to Multiple Stresses

Mengyao Zhou,Ge Wei,Yuxuan Fan,Enxi Li,Xuefei Tang*(),Guoqiang Fan*()   

  1. College of Forestry, Henan Agricultural University Zhengzhou 450046
  • Received:2026-01-05 Revised:2026-04-16 Online:2026-09-10 Published:2026-09-16
  • Contact: Xuefei Tang,Guoqiang Fan E-mail:Tangxf5@henau.edu.cn;zlxx64@henau.edu.cn

摘要:

目的: 系统解析白花泡桐CPP基因家族的分子特征及其在抗逆响应中的各种功能,为泡桐抗逆种质创制和高值化利用提供理论依据和基因资源。方法: 基于白花泡桐全基因组数据,综合运用生物信息学、转录组学、分子生物学等手段,系统鉴定PfCPP基因家族成员,并对其理化性质、基因结构、进化关系、顺式作用元件以及响应生物(植原体侵染)和非生物(干旱、盐)胁迫的表达模式进行深入分析。通过RT-qPCR验证关键基因的表达趋势,并结合亚细胞定位和蛋白互作预测探究其潜在功能。结果: 共鉴定到7个PfCPP基因(PfCPP1PfCPP7),分属3个亚家族,非均匀地分布于6条染色体上。顺式作用元件分析表明,该家族基因富含光响应、激素调控和逆境胁迫相关元件;共线性分析表明,片段重复是该家族扩张的主要方式;表达谱分析显示,PfCPP成员在不同胁迫下呈现特异性的表达分化:植原体侵染显著诱导PfCPP2/3/4/5/7上调,干旱胁迫下,PfCPP14上调而PfCPP57下调;盐胁迫下仅显著诱导PfCPP7上调。RT-qPCR结果验证了转录组数据的可靠性。亚细胞定位显示PfCPP4定位于细胞核,蛋白互作预测和分子对接结果表明PfCPP4/7可能通过与MYB类转录因子互作发挥调控功能。结论: 本研究系统鉴定白花泡桐PfCPP基因家族,揭示其结构特征和进化规律。PfCPP基因在不同逆境胁迫下表现出差异化的表达模式,表明其在泡桐抗逆响应中具有重要调控作用,且可能通过与MYB蛋白互作形成调控网络,协同调节泡桐的生长发育和逆境适应。

关键词: 白花泡桐, CPP基因家族, 胁迫, 表达分析, 高值化利用

Abstract:

Objective: This study systematically analyzed the molecular characteristics of the CPP gene family in P. fortunei and their functions in stress resistance, aiming to provide theoretical basis and genetic resources for the creation of stress-tolerant Paulownia germplasm and its high-value utilization. Method: Based on the whole-genome data of P. fortunei, the bioinformatics, transcriptomics, and molecular biology approaches were comprehensively used to systematically identify members of the PfCPP gene family, and analyze in-depth their physicochemical properties, gene structures, evolutionary relationships, cis-acting elements, and expression patterns in response to biotic (phytoplasma infection) and abiotic (drought, salt) stresses. RT-qPCR was used to verify the expression trends of key genes, and explore their potential functions by combining subcellular localization and protein-protein interaction prediction. Result: A total of 7 PfCPP genes (PfCPP1–PfCPP7) were identified, which were classified into 3 subfamilies and unevenly distributed on 6 chromosomes. Cis-acting element analysis showed that these genes were enriched in elements related to light response, hormone regulation, and stress response. Synteny analysis indicated that segmental duplication was the main driver of the family expansion. Expression profile analysis revealed that PfCPP members exhibited specific expression divergence under different stresses: phytoplasma infection significantly induced the upregulation of PfCPP2/3/4/5/7; under drought stress, PfCPP1–4 were upregulated while PfCPP5–7 were downregulated; only PfCPP7 was significantly induced under salt stress. RT-qPCR results verified the reliability of the transcriptomic data. Subcellular localization showed that PfCPP4 was localized in the nucleus. Protein-protein interaction prediction and molecular docking results suggested that PfCPP4/7 might exert regulatory functions by interacting with MYB-like transcription factors. Conclusion: This study has systematically identified the PfCPP gene family in P. fortunei and revealed their structural characteristics and evolutionary rules. The differential expression patterns of PfCPP genes under various stresses indicate their important regulatory roles in Paulownia stress responses. They may form regulatory networks by interacting with MYB proteins to coordinately regulate Paulownia growth, development, and stress adaptation.

Key words: Paulownia fortunei, CPP gene family, stress, expression analysis, high-value utilization

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