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林业科学 ›› 2008, Vol. 44 ›› Issue (10): 43-48.doi: 10.11707/j.1001-7488.20081008

• 论文 • 上一篇    下一篇

7个砂梨品种S基因型的确定及1个新S RNase基因的分离鉴定*

张 琳1 谭晓风1 周 建2 何小勇3 袁德义1 胡 姣1 龙洪旭1

  

  1. (1. 中南林业科技大学资源与环境学院 经济林育种与栽培国家林业局重点实验室 长沙410004;2. 河南科技学院园林学院 新乡453003;3. 浙江省丽水市科普工作指导站 丽水323000)
  • 收稿日期:2008-02-25 修回日期:1900-01-01 出版日期:2008-10-25 发布日期:2008-10-25

Determination of S Genotypes of Seven Cultivars and Identification of a Novel S RNase Allele in Pyrus pyrifolia

Zhang Lin1,Tan Xiaofeng1,Zhou Jian2,He Xiaoyong3,Yuan Deyi1,Hu Jiao1,Long Hongxu1

  

  1. (1. Key Laboratory of NonWood Forest Products of State ForestryAdministration College of Resources and Environment, Central South University of Forestry and Technology Changsha 410004; 2. Botanical Garden Institute, Henan Institute of Science and Technology Xinxiang 453003; 3. Lishui Popular Science Station of Zhejiang Province Lishui 323000)
  • Received:2008-02-25 Revised:1900-01-01 Online:2008-10-25 Published:2008-10-25

摘要:

砂梨是重要的经济树种,表现出典型的配子体自交不亲和性,在生产和育种上需鉴定品种的 S基因型以确定品种间的亲和性。选取7个砂梨品种为试验材料,使用梨SRNase(S基因)通用引物进行基因组PCR扩增,产物通过1.8%的琼脂糖凝胶电泳分析。结果表明:‘楚比香’等4个品种中产生了预期的2条电泳条带,而其他3个品种都只产生1条带产物,通过6%的聚丙烯酰胺电泳对该3个品种的PCR产物进一步分析,结果产物被成功分离。将7个品种中分离到的14个条带分别回收、克隆、测序及序列分析,从中鉴别出10个具有梨S RNase基因序列特征的S基因,其中‘政和大雪梨’中494 bp的基因片段被鉴定为新的S基因,暂命名为S 43 RNase(GenBank接受号EF566873)。RTPCR试验证明S43 RNase仅在花柱中特异表达,符合SRNase的表达特征。通过比对S43 RNase的基因组序列和cDNA序列,确定其内含子大小为294 bp。在推导氨基酸水平上,S43RNase与苹果亚科其他S RNase表现出65%~92%的相似性。

关键词: 砂梨, 配子体自交不亲和性, PCR, 自交不亲和基因型, S RNase

Abstract:

Pyrus pyrifolia is a commercially important fruit tree which exhibits gametophytic selfincompatibility (GSI). It is necessary to identify S genotypes of cultivars for determination of crosscompatible combination prior to performing pear plantation and breeding programs. In this study, seven cultivars of P. pyrifolia were used for S genotype analysis by PCRbased molecular method with primers designed from conserved sequences of known pear S RNases. Amplified products were analyzed by 1.8% agarose gel electrophoresis. In each of the four cultivars `Chubixiang', `Huangpishui', `Zhenghedaxueli' and `Hongtaiyang', two expected bands were generated. The amplified products in the other three cultivars did not show length polymorphism, and therefore were further separated by 6% polyacrylamide gel electrophoresis (PAGE). A total of 14 purified fragments from the seven cultivars were cloned and sequenced. Sequence analysis revealed that 10 alleles with typical structural features of pear S RNase were identified, of which one from `Zhenghedaxueli', with 494 bp, was determined as a new SRNase allele that was tentatively denominated as S 43 RNase (GenBank accession No.EF566873). RTPCR revealed that the S43RNase was expressed specifically in the styles, which is consistent with the expression pattern of S RNases. Comparison of genomic and cDNA sequences revealed there was an intron of 294 bp in the S43RNase gene. The deduced amino acid sequence shared 65% to 92% similarity with other Maloideae S RNases. This study will be helpful in pear production and breeding programs.

Key words: Pyrus pyrifolia, gametophytic selfincompatibility (GSI), PCR, S genotype, S RNase