Scientia Silvae Sinicae ›› 2021, Vol. 57 ›› Issue (4): 107-115.doi: 10.11707/j.1001-7488.20210411
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Ran He1,2,Ruizhen Wang2,Yue Ying1,Liangjian Qu1,*,Yong'an Zhang1
Received:
2020-03-02
Online:
2021-04-01
Published:
2021-05-21
Contact:
Liangjian Qu
CLC Number:
Ran He,Ruizhen Wang,Yue Ying,Liangjian Qu,Yong'an Zhang. Phenotypic and Virulence Gene Expression Difference of Esteya vermicola, A Biocontrol Fungus for Pine Wood Nematode under Carbon and Nitrogen Conditions[J]. Scientia Silvae Sinicae, 2021, 57(4): 107-115.
Table 1
Specific expression gene statistics between carbon and nitrogen group"
基因家族Gene family | 基因数量Gene number | |
N组N group | C组C group | |
短链脱氢酶家族Short-chain dehydrogenase | 9 | 5 |
酰胺酶Amidase | 5 | 2 |
真菌特异性转录因子结构域Fungal specific transcription factor domain | 15 | 5 |
糖基水解酶Glycosyl hydrolase 1 domain | 5 | 2 |
膜转运蛋白Major facilitator superfamily transporter 1 | 46 | 19 |
NAD结合域NAD-binding domains | 6 | 0 |
细胞色素P450 | 10 | 2 |
肽酶家族M20Peptidase family M20 | 1 | 1 |
枯草杆菌蛋白酶Peptidase_S8(Subtilase) | 3 | 0 |
蛋白激酶结构域Protein kinase domain | 5 | 4 |
糖转运蛋白Sugar transporter | 32 | 5 |
Table 2
Specific expression gene statistics between cluster_1 and cluster_2 in figure 8"
基因家族 Gene family | 类群1基因个数 Cluster 1 number | 类群2基因个数 Cluster 2 number |
短链脱氢酶家族Short-chain dehydrogenase | 7 | 2 |
真菌特异性转录因子结构域Fungal specific transcription factor domain | 4 | 0 |
膜转运蛋白MFS1Major facilitator superfamily transporter 1 | 8 | 3 |
钙蛋白酶Calpain | 1 | 0 |
丝氨酸羧肽酶S28Serine carboxypeptidase S28 | 1 | 0 |
枯草杆菌蛋白酶Peptidase_S8(Subtilase) | 2 | 0 |
糖转运蛋白Sugar transporter | 10 | 5 |
Table 3
Statistics of serine proteases gene differential expression in carbon and nitrogen groups"
基因编号 Gene id | 差异倍数的log2值 log2FoldChange | 校正的P值 Padj | 肽酶家族 Peptidase family |
ZGLK4627 | 8.51 | 0.00E+00 | S8 |
ZGLK1913 | 7.68 | 6.30E-174 | S8 |
ZGLK3896 | 4.15 | 3.27E-66 | S8 |
ZGLK1367 | 4.02 | 1.03E-91 | S8 |
ZGLK1021 | 3.75 | 6.00E-94 | S8 |
ZGLK1483 | 3.31 | 6.81E-17 | S8 |
novel.315 | 3.08 | 2.53E-29 | S8 |
ZGLK3512 | 2.83 | 3.33E-49 | S8 |
ZGLK4767 | 2.56 | 3.86E-32 | S8 |
ZGLK3672 | 2.33 | 6.06E-20 | S8 |
ZGLK1029 | 2.17 | 1.10E-06 | S8 |
ZGLK7350 | 1.70 | 1.32E-75 | S8 |
ZGLK3094 | 1.20 | 1.88E-36 | S8 |
ZGLK1168 | -0.96 | 2.40E-02 | S8 |
ZGLK2199 | 3.18 | 4.23E-65 | S28 |
ZGLK4188 | 1.84 | 1.04E-09 | S28 |
ZGLK5105 | 6.22 | 8.97E-186 | S28 |
Table 4
Statistics of differential expression of toxin-related genes"
基因编号 Gene_id | 差异倍数的对数值 log2FoldChange | 校正的P值 Padj | 注释到的基因功能 Annotated gene function | PHI编号 PHI_id | PHI注释到的突变表型 Mutant phenotype |
ZGLK3633 | 4.48 | 9.85E-110 | CaE-EAKt | 133 | LP-GDi |
ZGLK0769 | 3.68 | 9.73E-127 | CaE-EAKt | 133 | LP-GDi |
ZGLK4572 | 3.64 | 4.10E-101 | RTtB | 2315 | IV-Oe |
ZGLK4189 | 2.99 | 1.13E-34 | RTtB | 2315 | IV-Oe |
ZGLK3112 | 2.73 | 6.35E-45 | RTtB | 2315 | RV-GDe |
ZGLK2791 | 2.68 | 1.43E-07 | RTtB | 2315 | RV-GDe |
ZGLK1171 | 2.42 | 9.63E-43 | RTtB | 2315 | IV-Oe |
ZGLK6482 | 2.27 | 2.60E-97 | AFtB | 508 | LP-GDi |
ZGLK4979 | 2.21 | 8.45E-19 | AMtB | 160 | LP-GDi |
ZGLK5521 | 1.76 | 4.72E-20 | RTtB | 2315 | RV-GDe |
ZGLK2782 | 1.74 | 2.92E-12 | RTtB | 2315 | IV-Oe |
ZGLK5292 | 1.65 | 3.36E-46 | RTtB | 2315 | IV-Oe |
ZGLK6243 | 1.62 | 7.08E-15 | PolS | 55 | RV-GDi |
ZGLK1943 | 1.51 | 1.22E-14 | RTtB | 2315 | RV-GDe |
ZGLK1888 | 1.38 | 7.61E-08 | RTtB | 2315 | IV-Oe |
ZGLK6653 | 1.27 | 4.54E-12 | AKtB | 2832 | LP-GDe |
ZGLK2807 | 1.05 | 1.36E-16 | AFtB | 509 | LP-GDi |
ZGLK7429 | 1.02 | 5.33E-08 | PolS | 40 | RV-GDi |
ZGLK0285 | 0.81 | 5.16E-03 | RTtB | 2315 | IV-Oe |
ZGLK7585 | 0.69 | 3.47E-20 | RTtB | 2315 | RV-GDe |
ZGLK4528 | 0.65 | 2.95E-04 | RTtB | 2315 | IV-Oe |
ZGLK8291 | 0.62 | 1.15E-10 | ProMARTXt | 3354 | RV-GDe |
ZGLK0925 | -0.41 | 1.88E-02 | RTtB | 2315 | RV-GDe |
ZGLK1334 | -0.61 | 2.80E-02 | RTtB | 2315 | IV-Oe |
ZGLK6815 | -1.11 | 2.93E-12 | HCtB | 97 | RV-GDi |
ZGLK2055 | -1.40 | 1.47E-30 | RTtB | 2315 | IV-Oe |
ZGLK1081 | -1.45 | 2.13E-14 | PolS | 55 | RV-GDi |
ZGLK4421 | -1.67 | 3.82E-07 | CaE-EAKt | PHI: 133 | LP-GDi |
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