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林业科学 ›› 2025, Vol. 61 ›› Issue (6): 49-60.doi: 10.11707/j.1001-7488.LYKX20240529

• 研究论文 • 上一篇    下一篇

一种基于PDS同源基因的楸树瞬时基因沉默技术体系的建立

费越,王军辉,卢楠,张苗苗*()   

  1. 林木遗传育种全国重点实验室 国家林业和草原局林木培育重点实验室 中国林业科学研究院林业研究所 北京 100091
  • 收稿日期:2024-09-12 出版日期:2025-06-10 发布日期:2025-06-26
  • 通讯作者: 张苗苗 E-mail:mmzhang@caf.ac.cn
  • 基金资助:
    中央级公益性科研院所基本科研业务费专项资金(CAFYBB2021QD001-2);中央级公益性科研院所基本科研业务费专项资金(CAFYBB2020SY005)。

Establishment of a Transient Gene Silencing System in Catalpa bungei Based on PDS Homologous Genes

Yue Fei,Junhui Wang,Nan Lu,Miaomiao Zhang*()   

  1. State Key Laboratory of Tree Genetics and Breeding Key Laboratory of Tree Breeding and Cultivation of the National Forestry and Grassland Administration Research Institute of Forestry,Chinese Academy of Forestry Beijing 100091
  • Received:2024-09-12 Online:2025-06-10 Published:2025-06-26
  • Contact: Miaomiao Zhang E-mail:mmzhang@caf.ac.cn

摘要:

目的: 构建一种作用于楸树叶片的瞬时基因沉默技术体系,以阐明楸树八氢番茄红素脱氢酶基因CbuPDS-5在楸树叶片类胡萝卜素合成途径中的作用。方法: 以楸树为研究对象,在楸树基因组中鉴定楸树PDS基因家族成员,并基于表达模式分析明确CbuPDS在楸树各组织的表达量情况。进一步通过同源克隆从楸树中获得了CbuPDS-5的cDNA序列。通过构建系统发育树和同源蛋白序列比对分析其结构和类型。利用同源重组技术,构建TRV2-CbuPDS-5表达载体,利用农杆菌注射法侵染楸树叶片创制楸树基因沉默株系。同时,通过表型观察和实时荧光定量PCR技术分析CbuPDS-5基因沉默对楸树生长和叶片色素合成的影响。结果: 在楸树全基因组中鉴定出6个楸树PDS成员,并分别在叶片、花等组织中存在显著差异。其中,选择与番茄CaPDS相似度最高和在叶片中显著高表达的CbuPDS-5基因作为目标基因。本研究分离得到的CbuPDS-5基因全长1095 bp,其中ORF长948 bp,共编码315个氨基酸,含有1个二核苷酸结合基序,但在C端存在氨基酸缺失。功能验证结果表明,侵染2个月后的新生叶片呈现明显光漂白症状,并且多次侵染可显著增加叶片白化范围。qRT-PCR结果证明出现光漂白症状的叶片,其CbuPDS-5基因的相对表达水平显著降低。结论: 试验结果表明,VIGS系统可以用于楸树的瞬时基因沉默。楸树CbuPDS-5基因可作为指示基因更快验证林木瞬转体系的有效性和沉默时长,而由CbuPDS-5基因创制的花斑叶楸树可有效提高楸树的园林观赏价值,同时为观材两用的花斑叶楸树新品种的培育奠定遗传和材料基础。

关键词: 楸树, 八氢番茄红素脱氢酶基因(PDS), 基因沉默, 花斑叶

Abstract:

Objective: This study aims to establish a transient gene silencing system in leaves, in order to elucidate the role of PHYTOENE DESATURASE (PDS) gene of Catalpa bungei, CbuPDS-5, in the carotenoid synthesis pathway of the leaves. Method: In this study, C. bungei was used as the research subject, and the PDS gene family members were identified in the C. bungei genome. The expression pattern analysis was conducted to determine the expression levels of CbuPDSs in various tissues of C. bungei. The homologous cloning method was used to obtain the cDNA sequence of CbuPDS-5 from C. bungei. The structure and classification of CbuPDS-5 were analyzed by constructing a phylogenetic tree and performing homologous protein sequence alignments. The homologous recombination technique was used to construct a TRV2-CbuPDS-5 expression vector, and the Agrobacterium-mediated injection method was used to infect the leaves of C. bungei to create gene-silenced lines. Meanwhile, phenotypic observation and real-time PCR were performed to analyze the effects of CbuPDS-5 silencing on C. bungei growth and leaf pigment synthesis. Result: Six PDS members were identified in the C. bungei genome, with significant differences in their expression levels in different tissues such as leaves and flowers. Among them, the CbuPDS-5, which exhibited the highest similarity to tomato CaPDS, was highly expressed in leaves, and selected as the target gene. The full-length CbuPDS-5 was 1 095 bp, with a 948 bp ORF encoding 315 amino acids. It contained a dinucleotide binding motif, however had an amino acid deletion in the C-terminal. The functional validation showed that new leaves exhibited distinct photobleaching symptoms in two months after inoculation, and repeated inoculations significantly increased the extent of leaf whitening. The qRT-PCR analysis confirmed a significant reduction in the relative expression level of CbuPDS-5 in leaves with exhibiting photobleaching symptoms. Conclusion: The experimental results have demonstrated that the VIGS system can be used for gene silencing in C. bungei. CbuPDS-5 can serve as an indicator gene for rapid verification of the efficiency and duration of transient systems in woody plants. Additionally, the creation of variegated C. bungei through CbuPDS-5 silencing enhances its ornamental value and provides a foundation for breeding dual-purpose varieties with both ornamental and timber uses.

Key words: Catalpa bungei, PHYTOENE DESATURASE (PDS), gene silencing, whitening leaves

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