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林业科学 ›› 2008, Vol. 44 ›› Issue (5): 46-52.doi: 10.11707/j.1001-7488.20080510

• 论文 • 上一篇    下一篇

海南岛青梅AFLP标记的遗传多样性*

黄久香1 黄妃本1 许 涵2 李意德2 庄雪影1   

  1. (1.华南农业大学林学院 广州510642;2.中国林业科学研究院热带林业研究所 广州510520)
  • 收稿日期:2007-03-12 修回日期:1900-01-01 出版日期:2008-05-25 发布日期:2015-04-22
  • 通讯作者: 庄雪影

Genetic Diversity of Vatica mangachapoi in Hainan Island Revealed by AFLP

Huang Jiuxiang1,Huang Feiben1,Xu Han2,Li Yide2,Zhuang Xueying1   

  1. (1.Forestry College, South China Agricultural University Guangzhou 510642; 2.Institute of Tropical Forestry, CAF Guangzhou 510520)
  • Received:2007-03-12 Revised:1900-01-01 Online:2008-05-25 Published:2015-04-22

摘要:

采用AFLP标记检测海南岛青梅7个主要自然居群192株个体的遗传多样性及遗传结构。 应用筛选出的6对引物共扩增出频率大于5.00%的位点777个,其中多态位点比例为99.61%(774)。在种级水平上,Nei's 基因多样性指数(H)为0.266 1,Shannon 多态性信息指数(I)为0.420 4; 总基因多样度(H t)为0.268 4。居群水平的平均多态性位点数和多态性比例为617个和79.45%;H和I 平均值分别为0.215 3和0.335 2。遗传分化指数(Fst)和基因流(N m) 分别为0.198 0和1.012 7。UPGMA聚类和遗传距离与空间距离相关性分析结果表明,居群间遗传亲缘关系与其地理位置关系不明显(P=0.230 0,r2=0.232 5)。综合研究结果表明,青梅具有较高的遗传多样性,居群间有一定的遗传分化。建议采取人工促进天然林下层苗木生长和人工造林等措施,促进现有青梅居群遗传多样性保育和发展。

关键词: 青梅, AFLP, 遗传多样性, 遗传分化, 保育措施

Abstract:

Genetic variation and structure of seven populations of Vatica mangachapoi on Hainan Island were investigated by Amplified Fragment Length Polymorphism (AFLP) method. A total of 777 highly reproducible and discernible loci (frequency>5.00%) were generated from 192 individuals of 7 natural populations with 6 primer combinations, of which polymorphic loci were 99.61%. On the species level, total gene diversity (Ht) was 0.268 4; Nei′s gene diversity (H) and Shannon information index (I) were 0.266 1 and 0.420 4 respectively. On the population level, mean percentage and number of polymorphic loci were
79.45% and 617 respectivel
y; the means of Hand I were 0.215 3 and 0.335 2 respectively. The gene flow (Nm) was 1.012 7, and there existed 8020% of genetic variance within populations (Fst=0.198 0). The UPGMA analysis and mantel test showed that there was no significant correlation between genetic distance and geographic distance (r2=0.232 5, P=0.230 0). The results showed that V. mangachapoipossessed high genetic diversity on both population and species levels and a certain genetic differentiation among the populations. It is suggested that the conservation and development of existing genetic diversity of V. mangachapoi should be enhanced by suitable human interferences and afforestation approaches.

Key words: Vatica mangachapoi, AFLP, genetic diversity, genetic differentiation, conservation strategy