Scientia Silvae Sinicae ›› 2024, Vol. 60 ›› Issue (6): 94-101.doi: 10.11707/j.1001-7488.LYKX20230496
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Fanglan Wang,Ming Xiang,Xia Zhang,Lei Gu,Wen Liu,Faju Chen*()
Received:
2023-10-16
Online:
2024-06-25
Published:
2024-07-16
Contact:
Faju Chen
E-mail:chenfj616@163.com
CLC Number:
Fanglan Wang,Ming Xiang,Xia Zhang,Lei Gu,Wen Liu,Faju Chen. Cloning and Functional Analysis of AGAMOUS Homologous Gene in Rhus chinensis[J]. Scientia Silvae Sinicae, 2024, 60(6): 94-101.
Table 1
Primer sequences of PCR"
引物primer | 序列sequence(5'→3') | 用途Application |
5' RcAG1/2 | AACCCCAAAGGCAGAAACCT | RACE巢式PCR引物 RACE nested PCR primers |
3' RcAG1/2 | CATCGCTTCAGCTTGGTGTG | |
Long primer | CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT | |
Short primer | CTAATACGACTCACTATAGGGC | |
qRcAG F | GCAGAAATCGAATACATGCAGAAGAGGG | qRT-PCR引物 qRT-PCR primers |
qRcAG R | CTAACTGGAGGGCCATCTGGTCC | |
qRcag R | CTAACTGGAGGGCCATCTGGTCC | |
qRcag F | CAGATCCTTTTTGGAAATTGATTTGCACAAC | |
ACTIN F | TCCACCGTCCGATCATCAGAAC | |
ACTIN R | GCACGTTCCATTCCTCCACC | |
yfm-1300s AG/ag F | GCGAGCTCGGTACCCGGATGGCCTTTCCAAACGAATCAAGAG | 表达载体引物 Expression vector primers |
yfm-1300s AG/ag R | GCAGGTCGACTCTAGAGGCATATTAGACTAACTGGAGGGC | |
gRcag-F | CTTGAATGTCAAGGAACTCAAGAAC | 基因组序列引物 Genome sequence primers |
gRcag-R | TCGAAGGAGCTGGTTGTTGTTG |
Table 2
Protein information for phylogenetic analysis"
蛋白名称Protein name | 物种Species | 蛋白登录号GenBank |
PvMADS1 | 阿月浑子Pistacia vera | XP_031287460 |
MiAG | 杧果Mangifera indica | AER34988 |
CsAG | 甜橙Citrus sinensis | ADP02394 |
CcAG | 甜橙Citrus sinensis | XP_006449577 |
AG | 拟南芥Arabidopsis thaliana | P17839 |
SHP1 | 拟南芥Arabidopsis thaliana | P29381 |
SHP2 | 拟南芥Arabidopsis thaliana | P29385 |
STK | 拟南芥Arabidopsis thaliana | Q38836 |
AP1 | 拟南芥Arabidopsis thaliana | P35631 |
FUL | 拟南芥Arabidopsis thaliana | Q38876 |
AGL79 | 拟南芥Arabidopsis thaliana | AEE77628 |
AP3 | 拟南芥Arabidopsis thaliana | P35632 |
PI | 拟南芥Arabidopsis thaliana | P48007 |
SEP1 | 拟南芥Arabidopsis thaliana | P29382 |
SEP2 | 拟南芥Arabidopsis thaliana | P29384 |
SEP3 | 拟南芥Arabidopsis thaliana | O22456 |
SEP4 | 拟南芥Arabidopsis thaliana | NP_178466 |
FAR | 金鱼草Antirrhinum majus | CAB42988 |
PLE | 金鱼草Antirrhinum majus | AAB25101 |
FBP6 | 碧冬茄Petunia × hybrid | CAA48635 |
FBP3 | 碧冬茄Petunia × hybrid | CAA50549 |
FBP7 | 碧冬茄Petunia × hybrid | CAA57311 |
FBP11 | 碧冬茄Petunia × hybrid | CAA57445 |
TAG1 | 番茄Solanum lycopersicum | Q40168 |
TAGL1 | 番茄Solanum lycopersicum | NP_001300859 |
TAGL11 | 番茄Solanum lycopersicum | AAM33102 |
MtAGa | 蒺藜状苜蓿Medicago truncatula | AGV55405 |
MtAGb | 蒺藜状苜蓿Medicago truncatula | AGV55406 |
NbAG | 本氏烟Nicotiana benthamiana | AFK13159 |
NbSHP | 本氏烟Nicotiana benthamiana | AFK13160 |
MastAG | 星花木兰Magnolia stellata | AFH74392 |
MawuAG | 红花玉兰Magnolia wufengensis | AEO52692 |
MafiAG | 含笑Magnolia figo | AFH74385 |
MagrAG | 荷花木兰Magnolia grandiflora | AFH74382 |
EuplAG | 领春木Euptelea pleiosperma | ADC79699 |
LMADS10 | 麝香百合Lilium longiflorum | AIJ29174 |
OMADS4 | 文心兰Oncidium Gower Ramsey | AIJ29176 |
OsMADS3 | 稻Oryza sativa | Q40704 |
OsMADS58 | 稻Oryza sativa | Q2V0P1 |
Fig.2
Multiple alignment of AG proteins in Rhus chinensis and other species The black underline successively represents the M domain and the K domain, the middle of the M domain and the K domain is the I domain, and the K domain is followed by the C domain; The black dashed lines indicate the K1, K2, and K3 subdomains in the K domain; The black dotted box indicates the missing amino acid portion in RCAG protein; the black box indicates AG motif I and AG motif II."
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